nf-neuro/modules

An open-source Nextflow modules and workflows repository for neuroimaging maintained by the SCIL team.

sf-pediatric

v0.3.0

sf-pediatric is an end-to-end connectomics pipeline for pediatric (0-18y) dMRI and sMRI brain scans.

MultiQC_Neuroimaging

v0.1.4

A MultiQC plugin for comprehensive quality control of neuroimaging pipelines.

Halogenated flame retardant exposure was associated with pediatric gut microbiome profiles in a Canadian cohort

Yidan Zhang, Feng Gao, Peng Gao, Yihan Fan, Xinlei Wang, Yuqiu Yang, Anthony Gagnon, Guillaume Martinez, Virginie Gillet, Jiping Zhu, Jean-Philippe Bellenger, Andrea A. Baccarelli, Larissa Takser & Yike Shen

Gut Microbes Reports

Halogenated flame retardants, thyroid function biomarkers, attention-deficit/hyperactivity disorder-related traits and neurodevelopment in children: Recent evidence from a Canadian prospective birth cohort study

Yihan Fan, Yike Shen, Yidan Zhang, Anthony Gagnon, Guillaume Martinez, Virginie Gillet, Jonathan Posner, Andrew Michael, Jiping Zhu, Jean-Philippe Bellenger, Marie-France Langlois, Larissa Takser & Feng Gao

Environmental Research

Regional brain age deviations reveal divergent developmental pathways in youth

Anthony Gagnon, Marie A. Brunet, Maxime Descoteaux, Larissa Takser

Biological Psychiatry: Cognitive Neuroscience and Neuroimaging